Ashe, P, K Tu, JA Stobbs, JJ Dynes, M Vu, H Shaterian, S Kagale, KK Tanino, JPD Wanasundara, S Vail, C Karunakaran, TD Quilichini* (2025) Applications of synchrotron light in seed research: an array of x-ray and infrared imaging methodologies. Frontiers in Plant Science, 15, 1395952. *Corresponding author DOI: 10.3389/fpls.2024.1395952
Livingston, SJ, EY Chou, TD Quilichini, JE Page, AL Samuels (2023) Overcoming the challenges of preserving lipid‐rich Cannabis sativa L. glandular trichomes for transmission electron microscopy. Journal of Microscopy 291(1): 119-127 DOI: 10.1111/jmi.13165
Jiang, Y*, N'Diaye, A*, Koh, CS*, Quilichini, TD*, AS Shunmugam, MW Kirzinger, D Konkin, Y Bekkaoui, E Sari, JD Higgins, K Rozwadowski, AG Sharpe, CJ Pozniak, S Kagale (2023) The coordinated regulation of early meiotic stages is dominated by non‐coding RNAs and stage‐specific transcription in wheat. The Plant Journal 114(1): 209-224. DOI: 10.1111/tpj.16125
* co-first author
Yu, B, P Gao, J Song, H Yang, L Qin, X Yu, H Song, J Coulson, Y Bekkaoui, L Akhov, X Han, D Cram, Y Wei, LI Zaharia, J Zou, D Konkin, TD Quilichini, P Fobert, N Patterson, R Datla, D Xiang (2023) Spatiotemporal transcriptomics and metabolic profiling provide insights into gene regulatory networks during lentil seed development. The Plant Journal DOI: 10.1111/tpj.16205
Gilchrist, EJ, S Wang, TD Quilichini (2023) The impact of biotechnology and genomics on an ancient crop: Cannabis sativa. In Genomics and the Global Bioeconomy (pp. 177-204). Academic Press. DOI: 10.1016/B978-0-323-91601-1.00009-2
Jia, Z, P Gao, F Yin, TD Quilichini, H Yang, J Gao, T Chen, B Yang, J Zou, N Patterson, Q Yang, S Gillmor, R Datla, Q Li, D Xiang (2022) Asymmetric gene expression in grain development of reciprocal crosses between tetraploid and hexaploid wheats. Communications Biology 5(1): 1412. DOI: 10.1038/s42003-022-04374-w
Gao, P, L Qin, H Nguyen, H Sheng, TD Quilichini, D Xiang, LV Kochian, Y Wei, R Datla (2022) Clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9-generated diallelic mutants reveal Arabidopsis actin-related protein 2 function in the trafficking of syntaxin PEN1. Frontiers in Plant Science 13: 934002. DOI: 10.3389/fpls.2022.934002
Quilichini, TD, P Gao, B Yu, D Bing, R Datla, P Fobert, D Xiang. The seed coat’s impact on crop performance in pea (Pisum sativum L.). Plants 11(15): 2056. DOI: 10.3390/plants11152056
Gao, P*, Quilichini, TD*, H Yang, Q Li, KT Nilsen, L Qin, V Babic, L Liu, D Cram, A Pasha, E Esteban, J Condie, C Sidebottom, Y Zhang, Y Huang, W Zhang, P Bhowmik, LV Kochian, D Konkin, Y Wei, N Provart, S Kagale, M Smith, N Patterson, CS Gillmor, R Datla, D Xiang (2022) Evolutionary divergence in embryogenesis and seed coat development of U’s triangle Brassica species illustrated by a spatiotemporal transcriptome atlas. New Phytologist 233(1): 30-51. https://doi.org/10.1111/nph.17759
* co-first author
Grienenberger, E and TD Quilichini (2021) The toughest material in the plant kingdom: an update on sporopollenin. Frontiers in Plant Science 1745. https://doi.org/10.3389/fpls.2021.703864
Gilchrist, EJ, D Hegebarth, S Wang, TD Quilichini, J Sawler, SY Toh, C Foley, JE Page (2021) A rapid method for sex identification in Cannabis sativa using high resolution melt (HRM) technology. Botany 101(7) : 284-290. DOI:10.1139/cjb-2021-0168
Qin, L, L Liu, J Tu, G Yang, S Wang, TD Quilichini, P Gao, H Wang, G Peng, E Blancaflor, D Xiang, R Datla, K Wilson, Y Wei (2021) ARP2/3 complex modulates penetration resistance in Arabidopsis against powdery mildew invasion. The Plant Cell 33(9): 3151-3175. https://doi.org/10.1093/plcell/koab170
Gao, P*, Quilichini, TD*, C Zhai, L Qin, KT Nilsen, Q Li, AG Sharpe, LV Kochian, J Zou, ASN Reddy, Y Wei, CJ Pozniak, N Patterson, CS Gillmor, R Datla, D Xiang (2021) Alternative splicing dynamics and evolutionary divergence during embryogenesis in wheat species. Plant Biotechnology Journal 19(8): 1624. doi: 10.1111/pbi.13579
* co-first author
Nilsen, KT, S Walkowiak, D Xiang, P Gao, TD Quilichini, IR Willick, B Byrns, A N’Diaye, J Enns, K Wiebe, Y Ruan, M Craze, EJ Wallington, J Simmonds, C Uauy, R Datla, and CJ Pozniak (2020) Copy number variation of TdDof controls solid-stemmed architecture in wheat. Proceedings of the National Academy of Sciences 117(46): 28708-28718. https://doi.org/10.1073/pnas.2009418117
Qin, L, Z Zhou, Q Li, C Zhai, L Liu, TD Quilichini, P Gao, SA Kessler, Y Jaillais, R Datla, G Peng, D Xiang, Y Wei (2020) Specific recruitment of phosphoinositide species to the plant-pathogen interfacial membrane underlies Arabidopsis susceptibility to fungal infection. The Plant Cell 32(5): 1665-1688. DOI: 10.1105/tpc.19.00970
Livingston SJ*, Quilichini, TD*, JK Booth, DCJ Wong, KH Rensing, J Laflamme-Yonkman, SD Castellarin, J Bohlmann, JE Page, AL Samuels (2020) Cannabis glandular trichomes alter morphology and metabolite content during flower maturation. The Plant Journal 101(1): 37-56. DOI: 10.1111/tpj.14516
* co-first author
Xiang, D*, Quilichini, TD*, Z Liu, P Gao, Y Pan, Q Li, KT Nilsen, P Venglat, E Esteban, A Pasha, Y Wang, R Wen, Z Zhang, Z Hao, E Wang, Y Wei, R Cuthbert, LV Kochian, A Sharpe, N Provart, D Weijers, CS Gillmor, CJ Pozniak, R Datla (2019) The transcriptional landscape of polyploid wheats and their diploid ancestors during embryogenesis and grain development. The Plant Cell 31(12): 2888-2911. https://doi.org/10.1105/tpc.19.00397
Pandey, PK, TD Quilichini, N Vaid, P Gao, D Xiang, R Datla (2019) Versatile and multifaceted CRISPR/Cas gene editing tool for plant research. In Seminars in Cell and Devel. Biology 96: 107-114. Academic Press. DOI: 10.1016/j.semcdb.2019.04.012
Quilichini, TD, P Gao, PK Pandey, D Xiang, M Ren, R Datla (2019) A role for TOR signaling in every stage of plant life. Journal of Experimental Botany 70(8): 2285-2296. DOI: 10.1093/jxb/erz125
Gao, P, D Xiang, TD Quilichini, P Venglat, PK Pandey, E Wang, CS Gillmor, R Datla (2019) Gene expression atlas of embryo development in Arabidopsis. Plant Reproduction 32(1):93-104. DOI: 10.1007/s00497-019-00364-x
Deng, Y, R Srivastava, TD Quilichini, H Dong, Y Bao, HT Horner, SH Howell (2016) IRE1, a component of the unfolded protein response signaling pathway, protects pollen development in Arabidopsis from heat stress. The Plant Journal 88(2): 193-204. DOI: 10.1111/tpj.13239
Quilichini, TD, AL Samuels, CJ Douglas (2015) Analysis of developing pollen grains within intact Arabidopsis thaliana anthers by Olympus two-photon laser scanning microscopy. Bio-protocol 5(23): e1677. DOI: 10.21769/BioProtoc.1677
Quilichini, TD, E Grienenberger, CJ Douglas (2015) The biosynthesis, composition and assembly of the sporopollenin-based outer pollen wall: a tough case to crack. Phytochemistry 113: 170-182. DOI: 10.1016/j.phytochem.2014.05.002
Quilichini, TD, AL Samuels, CJ Douglas (2014) ABCG26-mediated polyketide trafficking and hydroxycinnamoyl spermidines contribute to pollen wall exine formation in Arabidopsis. The Plant Cell 26(11): 4483-4498. DOI: 10.1105/tpc.114.130484
Quilichini, TD, CJ Douglas, AL Samuels (2014) New views of tapetum ultrastructure and pollen exine development in Arabidopsis thaliana. Annals of Botany 114(6): 1189-1201. DOI: 10.1093/aob/mcu042
Qin, P, B Tu, Y Wang, L Deng, TD Quilichini, T Ling, H Wang, B Ma, S Li (2012) ABCG15 Encodes an ABC transporter protein, and is essential for post-meiotic anther and pollen exine development in rice. Plant Cell Physiology 54: 138-154. DOI: 10.1093/pcp/pcs162
Quilichini, TD, M Friedmann, AL Samuels, CJ Douglas (2010) ATP-Binding Cassette Transporter G26 is required for male fertility and pollen exine formation in Arabidopsis. Plant Physiology 154: 678-690. DOI: 10.1104/pp.110.161968
Quilichini, TD and DG Muench (2008) The microtubule proteome: A role in regulating protein synthesis and import into organelles? In: The Plant Cytoskeleton: a Key Tool for Agro-Biotechnology, pp. 267-281. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-8843-8_13