Livingston, SJ, EY Chou, TD Quilichini, JE Page, AL Samuels (2023) Overcoming the challenges of preserving lipid‐rich Cannabis sativa L. glandular trichomes for transmission electron microscopy. Journal of Microscopy 291(1): 119-127 DOI: 10.1111/jmi.13165
Jiang, Y*, N'Diaye, A*, Koh, CS*, Quilichini, TD*, AS Shunmugam, MW Kirzinger, D Konkin, Y Bekkaoui, E Sari, JD Higgins, K Rozwadowski, AG Sharpe, CJ Pozniak, S Kagale (2023) The coordinated regulation of early meiotic stages is dominated by non‐coding RNAs and stage‐specific transcription in wheat. The Plant Journal 114(1): 209-224. DOI: 10.1111/tpj.16125
* co-first author
Yu, B, P Gao, J Song, H Yang, L Qin, X Yu, H Song, J Coulson, Y Bekkaoui, L Akhov, X Han, D Cram, Y Wei, LI Zaharia, J Zou, D Konkin, TD Quilichini, P Fobert, N Patterson, R Datla, D Xiang (2023) Spatiotemporal transcriptomics and metabolic profiling provide insights into gene regulatory networks during lentil seed development. The Plant Journal DOI: 10.1111/tpj.16205
Gilchrist, EJ, S Wang, TD Quilichini (2023) The impact of biotechnology and genomics on an ancient crop: Cannabis sativa. In Genomics and the Global Bioeconomy (pp. 177-204). Academic Press. DOI: 10.1016/B978-0-323-91601-1.00009-2
Jia, Z, P Gao, F Yin, TD Quilichini, H Yang, J Gao, T Chen, B Yang, J Zou, N Patterson, Q Yang, S Gillmor, R Datla, Q Li, D Xiang (2022) Asymmetric gene expression in grain development of reciprocal crosses between tetraploid and hexaploid wheats. Communications Biology 5(1): 1412. DOI: 10.1038/s42003-022-04374-w
Gao, P, L Qin, H Nguyen, H Sheng, TD Quilichini, D Xiang, LV Kochian, Y Wei, R Datla (2022) Clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9-generated diallelic mutants reveal Arabidopsis actin-related protein 2 function in the trafficking of syntaxin PEN1. Frontiers in Plant Science 13: 934002. DOI: 10.3389/fpls.2022.934002
Quilichini, TD, P Gao, B Yu, D Bing, R Datla, P Fobert, D Xiang. The seed coat’s impact on crop performance in pea (Pisum sativum L.). Plants 11(15): 2056. DOI: 10.3390/plants11152056
Gao, P*, Quilichini, TD*, H Yang, Q Li, KT Nilsen, L Qin, V Babic, L Liu, D Cram, A Pasha, E Esteban, J Condie, C Sidebottom, Y Zhang, Y Huang, W Zhang, P Bhowmik, LV Kochian, D Konkin, Y Wei, N Provart, S Kagale, M Smith, N Patterson, CS Gillmor, R Datla, D Xiang (2022) Evolutionary divergence in embryogenesis and seed coat development of U’s triangle Brassica species illustrated by a spatiotemporal transcriptome atlas. New Phytologist 233(1): 30-51. https://doi.org/10.1111/nph.17759
* co-first author
Grienenberger, E and TD Quilichini (2021) The toughest material in the plant kingdom: an update on sporopollenin. Frontiers in Plant Science 1745. https://doi.org/10.3389/fpls.2021.703864
Gilchrist, EJ, D Hegebarth, S Wang, TD Quilichini, J Sawler, SY Toh, C Foley, JE Page (2021) A rapid method for sex identification in Cannabis sativa using high resolution melt (HRM) technology. Botany 101(7) : 284-290. DOI:10.1139/cjb-2021-0168
Qin, L, L Liu, J Tu, G Yang, S Wang, TD Quilichini, P Gao, H Wang, G Peng, E Blancaflor, D Xiang, R Datla, K Wilson, Y Wei (2021) ARP2/3 complex modulates penetration resistance in Arabidopsis against powdery mildew invasion. The Plant Cell 33(9): 3151-3175. https://doi.org/10.1093/plcell/koab170
Gao, P*, Quilichini, TD*, C Zhai, L Qin, KT Nilsen, Q Li, AG Sharpe, LV Kochian, J Zou, ASN Reddy, Y Wei, CJ Pozniak, N Patterson, CS Gillmor, R Datla, D Xiang (2021) Alternative splicing dynamics and evolutionary divergence during embryogenesis in wheat species. Plant Biotechnology Journal 19(8): 1624. doi: 10.1111/pbi.13579
* co-first author
Nilsen, KT, S Walkowiak, D Xiang, P Gao, TD Quilichini, IR Willick, B Byrns, A N’Diaye, J Enns, K Wiebe, Y Ruan, M Craze, EJ Wallington, J Simmonds, C Uauy, R Datla, and CJ Pozniak (2020) Copy number variation of TdDof controls solid-stemmed architecture in wheat. Proceedings of the National Academy of Sciences 117(46): 28708-28718. https://doi.org/10.1073/pnas.2009418117
Qin, L, Z Zhou, Q Li, C Zhai, L Liu, TD Quilichini, P Gao, SA Kessler, Y Jaillais, R Datla, G Peng, D Xiang, Y Wei (2020) Specific recruitment of phosphoinositide species to the plant-pathogen interfacial membrane underlies Arabidopsis susceptibility to fungal infection. The Plant Cell 32(5): 1665-1688. DOI: 10.1105/tpc.19.00970
Livingston SJ*, Quilichini, TD*, JK Booth, DCJ Wong, KH Rensing, J Laflamme-Yonkman, SD Castellarin, J Bohlmann, JE Page, AL Samuels (2020) Cannabis glandular trichomes alter morphology and metabolite content during flower maturation. The Plant Journal 101(1): 37-56. DOI: 10.1111/tpj.14516
* co-first author
Xiang, D*, Quilichini, TD*, Z Liu, P Gao, Y Pan, Q Li, KT Nilsen, P Venglat, E Esteban, A Pasha, Y Wang, R Wen, Z Zhang, Z Hao, E Wang, Y Wei, R Cuthbert, LV Kochian, A Sharpe, N Provart, D Weijers, CS Gillmor, CJ Pozniak, R Datla (2019) The transcriptional landscape of polyploid wheats and their diploid ancestors during embryogenesis and grain development. The Plant Cell 31(12): 2888-2911. https://doi.org/10.1105/tpc.19.00397
Pandey, PK, TD Quilichini, N Vaid, P Gao, D Xiang, R Datla (2019) Versatile and multifaceted CRISPR/Cas gene editing tool for plant research. In Seminars in Cell and Devel. Biology 96: 107-114. Academic Press. DOI: 10.1016/j.semcdb.2019.04.012
Quilichini, TD, P Gao, PK Pandey, D Xiang, M Ren, R Datla (2019) A role for TOR signaling in every stage of plant life. Journal of Experimental Botany 70(8): 2285-2296. DOI: 10.1093/jxb/erz125
Gao, P, D Xiang, TD Quilichini, P Venglat, PK Pandey, E Wang, CS Gillmor, R Datla (2019) Gene expression atlas of embryo development in Arabidopsis. Plant Reproduction 32(1):93-104. DOI: 10.1007/s00497-019-00364-x
Deng, Y, R Srivastava, TD Quilichini, H Dong, Y Bao, HT Horner, SH Howell (2016) IRE1, a component of the unfolded protein response signaling pathway, protects pollen development in Arabidopsis from heat stress. The Plant Journal 88(2): 193-204. DOI: 10.1111/tpj.13239
Quilichini, TD, AL Samuels, CJ Douglas (2015) Analysis of developing pollen grains within intact Arabidopsis thaliana anthers by Olympus two-photon laser scanning microscopy. Bio-protocol 5(23): e1677. DOI: 10.21769/BioProtoc.1677
Quilichini, TD, E Grienenberger, CJ Douglas (2015) The biosynthesis, composition and assembly of the sporopollenin-based outer pollen wall: a tough case to crack. Phytochemistry 113: 170-182. DOI: 10.1016/j.phytochem.2014.05.002
Quilichini, TD, AL Samuels, CJ Douglas (2014) ABCG26-mediated polyketide trafficking and hydroxycinnamoyl spermidines contribute to pollen wall exine formation in Arabidopsis. The Plant Cell 26(11): 4483-4498. DOI: 10.1105/tpc.114.130484
Quilichini, TD, CJ Douglas, AL Samuels (2014) New views of tapetum ultrastructure and pollen exine development in Arabidopsis thaliana. Annals of Botany 114(6): 1189-1201. DOI: 10.1093/aob/mcu042
Qin, P, B Tu, Y Wang, L Deng, TD Quilichini, T Ling, H Wang, B Ma, S Li (2012) ABCG15 Encodes an ABC transporter protein, and is essential for post-meiotic anther and pollen exine development in rice. Plant Cell Physiology 54: 138-154. DOI: 10.1093/pcp/pcs162
Quilichini, TD, M Friedmann, AL Samuels, CJ Douglas (2010) ATP-Binding Cassette Transporter G26 is required for male fertility and pollen exine formation in Arabidopsis. Plant Physiology 154: 678-690. DOI: 10.1104/pp.110.161968
Quilichini, TD and DG Muench (2008) The microtubule proteome: A role in regulating protein synthesis and import into organelles? In: The Plant Cytoskeleton: a Key Tool for Agro-Biotechnology, pp. 267-281. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-8843-8_13
Jiang, Y*, N'Diaye, A*, Koh, CS*, Quilichini, TD*, AS Shunmugam, MW Kirzinger, D Konkin, Y Bekkaoui, E Sari, JD Higgins, K Rozwadowski, AG Sharpe, CJ Pozniak, S Kagale (2023) The coordinated regulation of early meiotic stages is dominated by non‐coding RNAs and stage‐specific transcription in wheat. The Plant Journal 114(1): 209-224. DOI: 10.1111/tpj.16125
* co-first author
Yu, B, P Gao, J Song, H Yang, L Qin, X Yu, H Song, J Coulson, Y Bekkaoui, L Akhov, X Han, D Cram, Y Wei, LI Zaharia, J Zou, D Konkin, TD Quilichini, P Fobert, N Patterson, R Datla, D Xiang (2023) Spatiotemporal transcriptomics and metabolic profiling provide insights into gene regulatory networks during lentil seed development. The Plant Journal DOI: 10.1111/tpj.16205
Gilchrist, EJ, S Wang, TD Quilichini (2023) The impact of biotechnology and genomics on an ancient crop: Cannabis sativa. In Genomics and the Global Bioeconomy (pp. 177-204). Academic Press. DOI: 10.1016/B978-0-323-91601-1.00009-2
Jia, Z, P Gao, F Yin, TD Quilichini, H Yang, J Gao, T Chen, B Yang, J Zou, N Patterson, Q Yang, S Gillmor, R Datla, Q Li, D Xiang (2022) Asymmetric gene expression in grain development of reciprocal crosses between tetraploid and hexaploid wheats. Communications Biology 5(1): 1412. DOI: 10.1038/s42003-022-04374-w
Gao, P, L Qin, H Nguyen, H Sheng, TD Quilichini, D Xiang, LV Kochian, Y Wei, R Datla (2022) Clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9-generated diallelic mutants reveal Arabidopsis actin-related protein 2 function in the trafficking of syntaxin PEN1. Frontiers in Plant Science 13: 934002. DOI: 10.3389/fpls.2022.934002
Quilichini, TD, P Gao, B Yu, D Bing, R Datla, P Fobert, D Xiang. The seed coat’s impact on crop performance in pea (Pisum sativum L.). Plants 11(15): 2056. DOI: 10.3390/plants11152056
Gao, P*, Quilichini, TD*, H Yang, Q Li, KT Nilsen, L Qin, V Babic, L Liu, D Cram, A Pasha, E Esteban, J Condie, C Sidebottom, Y Zhang, Y Huang, W Zhang, P Bhowmik, LV Kochian, D Konkin, Y Wei, N Provart, S Kagale, M Smith, N Patterson, CS Gillmor, R Datla, D Xiang (2022) Evolutionary divergence in embryogenesis and seed coat development of U’s triangle Brassica species illustrated by a spatiotemporal transcriptome atlas. New Phytologist 233(1): 30-51. https://doi.org/10.1111/nph.17759
* co-first author
Grienenberger, E and TD Quilichini (2021) The toughest material in the plant kingdom: an update on sporopollenin. Frontiers in Plant Science 1745. https://doi.org/10.3389/fpls.2021.703864
Gilchrist, EJ, D Hegebarth, S Wang, TD Quilichini, J Sawler, SY Toh, C Foley, JE Page (2021) A rapid method for sex identification in Cannabis sativa using high resolution melt (HRM) technology. Botany 101(7) : 284-290. DOI:10.1139/cjb-2021-0168
Qin, L, L Liu, J Tu, G Yang, S Wang, TD Quilichini, P Gao, H Wang, G Peng, E Blancaflor, D Xiang, R Datla, K Wilson, Y Wei (2021) ARP2/3 complex modulates penetration resistance in Arabidopsis against powdery mildew invasion. The Plant Cell 33(9): 3151-3175. https://doi.org/10.1093/plcell/koab170
Gao, P*, Quilichini, TD*, C Zhai, L Qin, KT Nilsen, Q Li, AG Sharpe, LV Kochian, J Zou, ASN Reddy, Y Wei, CJ Pozniak, N Patterson, CS Gillmor, R Datla, D Xiang (2021) Alternative splicing dynamics and evolutionary divergence during embryogenesis in wheat species. Plant Biotechnology Journal 19(8): 1624. doi: 10.1111/pbi.13579
* co-first author
Nilsen, KT, S Walkowiak, D Xiang, P Gao, TD Quilichini, IR Willick, B Byrns, A N’Diaye, J Enns, K Wiebe, Y Ruan, M Craze, EJ Wallington, J Simmonds, C Uauy, R Datla, and CJ Pozniak (2020) Copy number variation of TdDof controls solid-stemmed architecture in wheat. Proceedings of the National Academy of Sciences 117(46): 28708-28718. https://doi.org/10.1073/pnas.2009418117
Qin, L, Z Zhou, Q Li, C Zhai, L Liu, TD Quilichini, P Gao, SA Kessler, Y Jaillais, R Datla, G Peng, D Xiang, Y Wei (2020) Specific recruitment of phosphoinositide species to the plant-pathogen interfacial membrane underlies Arabidopsis susceptibility to fungal infection. The Plant Cell 32(5): 1665-1688. DOI: 10.1105/tpc.19.00970
Livingston SJ*, Quilichini, TD*, JK Booth, DCJ Wong, KH Rensing, J Laflamme-Yonkman, SD Castellarin, J Bohlmann, JE Page, AL Samuels (2020) Cannabis glandular trichomes alter morphology and metabolite content during flower maturation. The Plant Journal 101(1): 37-56. DOI: 10.1111/tpj.14516
* co-first author
Xiang, D*, Quilichini, TD*, Z Liu, P Gao, Y Pan, Q Li, KT Nilsen, P Venglat, E Esteban, A Pasha, Y Wang, R Wen, Z Zhang, Z Hao, E Wang, Y Wei, R Cuthbert, LV Kochian, A Sharpe, N Provart, D Weijers, CS Gillmor, CJ Pozniak, R Datla (2019) The transcriptional landscape of polyploid wheats and their diploid ancestors during embryogenesis and grain development. The Plant Cell 31(12): 2888-2911. https://doi.org/10.1105/tpc.19.00397
Pandey, PK, TD Quilichini, N Vaid, P Gao, D Xiang, R Datla (2019) Versatile and multifaceted CRISPR/Cas gene editing tool for plant research. In Seminars in Cell and Devel. Biology 96: 107-114. Academic Press. DOI: 10.1016/j.semcdb.2019.04.012
Quilichini, TD, P Gao, PK Pandey, D Xiang, M Ren, R Datla (2019) A role for TOR signaling in every stage of plant life. Journal of Experimental Botany 70(8): 2285-2296. DOI: 10.1093/jxb/erz125
Gao, P, D Xiang, TD Quilichini, P Venglat, PK Pandey, E Wang, CS Gillmor, R Datla (2019) Gene expression atlas of embryo development in Arabidopsis. Plant Reproduction 32(1):93-104. DOI: 10.1007/s00497-019-00364-x
Deng, Y, R Srivastava, TD Quilichini, H Dong, Y Bao, HT Horner, SH Howell (2016) IRE1, a component of the unfolded protein response signaling pathway, protects pollen development in Arabidopsis from heat stress. The Plant Journal 88(2): 193-204. DOI: 10.1111/tpj.13239
Quilichini, TD, AL Samuels, CJ Douglas (2015) Analysis of developing pollen grains within intact Arabidopsis thaliana anthers by Olympus two-photon laser scanning microscopy. Bio-protocol 5(23): e1677. DOI: 10.21769/BioProtoc.1677
Quilichini, TD, E Grienenberger, CJ Douglas (2015) The biosynthesis, composition and assembly of the sporopollenin-based outer pollen wall: a tough case to crack. Phytochemistry 113: 170-182. DOI: 10.1016/j.phytochem.2014.05.002
Quilichini, TD, AL Samuels, CJ Douglas (2014) ABCG26-mediated polyketide trafficking and hydroxycinnamoyl spermidines contribute to pollen wall exine formation in Arabidopsis. The Plant Cell 26(11): 4483-4498. DOI: 10.1105/tpc.114.130484
Quilichini, TD, CJ Douglas, AL Samuels (2014) New views of tapetum ultrastructure and pollen exine development in Arabidopsis thaliana. Annals of Botany 114(6): 1189-1201. DOI: 10.1093/aob/mcu042
Qin, P, B Tu, Y Wang, L Deng, TD Quilichini, T Ling, H Wang, B Ma, S Li (2012) ABCG15 Encodes an ABC transporter protein, and is essential for post-meiotic anther and pollen exine development in rice. Plant Cell Physiology 54: 138-154. DOI: 10.1093/pcp/pcs162
Quilichini, TD, M Friedmann, AL Samuels, CJ Douglas (2010) ATP-Binding Cassette Transporter G26 is required for male fertility and pollen exine formation in Arabidopsis. Plant Physiology 154: 678-690. DOI: 10.1104/pp.110.161968
Quilichini, TD and DG Muench (2008) The microtubule proteome: A role in regulating protein synthesis and import into organelles? In: The Plant Cytoskeleton: a Key Tool for Agro-Biotechnology, pp. 267-281. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-8843-8_13